我正在尝试使用该survminer
软件包绘制生存曲线和相关风险表。我无法绘制风险表,所有其他元素都可以正常工作。RStudio 要么引发以下错误:
bl_make_text_box(token,drawing_context$gp,drawing_context$yoff_pt)中的错误:包'Rcpp'未提供函数'Rcpp_precious_remove'
或卡住并变得没有反应。
我已经安装并加载了Rcpp
包但没有成功,我还重新启动了 R 并清除了工作区。这发生在多个数据集上。一个例子是来自survminer
备忘单的下面的代码,它给了我同样的问题。非常感谢任何建议!我怀疑这与我的环境有关,但我不知道是什么。
library("survival")
fit <- survfit(Surv(time,status)
~ sex, data = lung)
library("survminer")
ggsurvplot(fit, data = lung,
conf.int = TRUE,
pval = TRUE,
fun = "pct",
risk.table = TRUE,
size = 1,
linetype = "strata",
palette = c("#E7B800",
"#2E9FDF"),
legend = "bottom",
legend.title = "Sex",
legend.labs = c("Male",
"Female"))
按要求编辑
> sessionInfo()
R version 4.1.0 (2021-05-18)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19043)
Matrix products: default
locale:
[1] LC_COLLATE=English_Australia.1252 LC_CTYPE=English_Australia.1252 LC_MONETARY=English_Australia.1252 LC_NUMERIC=C
[5] LC_TIME=English_Australia.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] survminer_0.4.9 ggpubr_0.4.0 ggplot2_3.3.3 survival_3.2-11
loaded via a namespace (and not attached):
[1] Rcpp_1.0.6 lattice_0.20-44 tidyr_1.1.3 zoo_1.8-9 assertthat_0.2.1 digest_0.6.27 utf8_1.2.1 R6_2.5.0
[9] cellranger_1.1.0 backports_1.2.1 evaluate_0.14 pillar_1.6.1 rlang_0.4.11 curl_4.3.1 readxl_1.3.1 data.table_1.14.0
[17] car_3.0-11 Matrix_1.3-3 rmarkdown_2.8 labeling_0.4.2 splines_4.1.0 stringr_1.4.0 foreign_0.8-81 munsell_0.5.0
[25] gridtext_0.1.4 tinytex_0.31 broom_0.7.8 compiler_4.1.0 xfun_0.23 pkgconfig_2.0.3 htmltools_0.5.1.1 ggtext_0.1.1
[33] tidyselect_1.1.1 tibble_3.1.2 gridExtra_2.3 km.ci_0.5-2 rio_0.5.27 fansi_0.4.2 crayon_1.4.1 dplyr_1.0.6
[41] withr_2.4.2 grid_4.1.0 xtable_1.8-4 gtable_0.3.0 lifecycle_1.0.0 DBI_1.1.1 magrittr_2.0.1 KMsurv_0.1-5
[49] scales_1.1.1 zip_2.2.0 stringi_1.6.1 carData_3.0-4 farver_2.1.0 ggsignif_0.6.2 xml2_1.3.2 ellipsis_0.3.2
[57] survMisc_0.5.5 generics_0.1.0 vctrs_0.3.8 openxlsx_4.2.4 tools_4.1.0 forcats_0.5.1 glue_1.4.2 markdown_1.1
[65] purrr_0.3.4 hms_1.1.0 abind_1.4-5 yaml_2.2.1 colorspace_2.0-1 rstatix_0.7.0 knitr_1.33 haven_2.4.1